Items where Subject is "Microbiology"

Article

Abeynayake, S. W., Fiorito, S., Dinsdale, A., Whattam, M., Crowe, B., Sparks, K., Campbell, P. R. and Gambley, C. (2021) A Rapid and Cost-Effective Identification of Invertebrate Pests at the Borders Using MinION Sequencing of DNA Barcodes. Genes, 12 (8). ISSN 2073-4425

Agnihotri, K., Oakey, J., Smith, C. S., Weir, R., Pyke, A. and Melville, L. (2021) Genome-scale molecular and phylogenetic characterization of Middle Point orbiviruses from Australia. Journal of General Virology, 102 (12). ISSN 1465-2099

Al-Ajmi, D., Padmanabha, J., Denman, S.E., Gilbert, R. A., Al Jassim, R.A.M. and McSweeney, C.S. (2006) Evaluation of a PCR detection method for Escherichia coli O157:H7/H– bovine faecal samples. Letters in Applied Microbiology, 42 (4). pp. 386-391. ISSN 0266-8254

Armitt, J. and Smith, M.G. (1965) Effectiveness of a quaternary ammonium detergent-sanitizer for sanitizing milking equipment. Queensland Journal of Agricultural and Animal Sciences, 22 (3). pp. 357-363.

Attwood, G. T., Altermann, E., Kelly, W. J., Leahy, S. C., Zhang, L. and Morrison, M. (2011) Exploring rumen methanogen genomes to identify targets for methane mitigation strategies. Animal Feed Science and Technology, 166–16 . pp. 65-75. ISSN 0377-8401

Babra, C., Tiwari, J. G., Pier, G., Thein, T. H., Sunagar, R., Sundareshan, S., Isloor, S., Hegde, N. R., de Wet, S., Deighton, M., Gibson, J., Costantino, P., Wetherall, J. and Mukkur, T. (2013) The persistence of biofilm-associated antibiotic resistance of Staphylococcus aureus isolated from clinical bovine mastitis cases in Australia. Folia Microbiologica, 58 (6). pp. 469-474. ISSN 0015-5632

Bajagai, Y. S., Yeoh, Y. K., Li, X., Zhang, D., Dennis, P. G., Ouwerkerk, D., Dart, P. J., Klieve, A. V. and Bryden, W. L. (2023) Enhanced meat chicken productivity in response to the probiotic Bacillus amyloliquefaciens H57 is associated with the enrichment of microbial amino acid and vitamin biosynthesis pathways. Journal of Applied Microbiology, 134 (5). ISSN 1364-5072

Bala, N., Aitken, E. A. B., Fechner, N., Cusack, A. and Steadman, K. J. (2011) Evaluation of antibacterial activity of Australian basidiomycetous macrofungi using a high-throughput 96-well plate assay. Pharmaceutical Biology, 49 (5). pp. 492-500. ISSN 1388-0209

Ballard, E. L., Dietzgen, R. G., Sly, L. I., Gouk, C., Horlock, C. and Fegan, M. (2011) Development of a Bio-PCR Protocol for the Detection of Xanthomonas arboricola pv. pruni. Plant Disease, 95 (9). pp. 1109-1115. ISSN 0191-2917

Berens, S. J., Brayton, K. A., Molloy, J. B., Bock, R. E., Lew, A. E. and McElwain, T. F. (2005) Merozoite surface antigen 2 proteins of Babesia bovis vaccine breakthrough isolates contain a unique hypervariable region composed of degenerate repeats. Infection and immunity, 73 (11). pp. 7180-7189. ISSN 0019-95671098-5522

Blackall, P.J., Eaves, L. E. and Rogers, D.G. (1990) Proposal of a new serovar and altered nomenclature for Haemophilus paragallinarum in the Kume hemagglutinin scheme. Journal of Clinical Microbiology, 28 (6). pp. 1185-1187. ISSN 0095-1137

Burgess, T. I., Tan, Y. P., Garnas, J., Edwards, J., Scarlett, K. A., Shuttleworth, L. A., Daniel, R., Dann, E. K., Parkinson, L. E., Dinh, Q., Shivas, R. G. and Jami, F. (2019) Current status of the Botryosphaeriaceae in Australia. Australasian Plant Pathology, 48 (1). pp. 35-44. ISSN 1448-6032

Chen, W., Zuo, H., Rolfe, B., Schembri, M. A., Cobbold, R. N., Zhang, B., Mahony, T. J. and Xu, Z. P. (2018) Clay nanoparticles co-deliver three antigens to promote potent immune responses against pathogenic Escherichia coli. Journal of Controlled Release, 292 . pp. 196-209. ISSN 01683659 (ISSN)

Chinivasagam, H.N. and Blackall, P.J. (2005) Investigation and application of methods for enumerating heterotrophs and Escherichia coli in the air within piggery sheds. Journal of Applied Microbiology, 98 (5). pp. 1137-1145.

Chinivasagam, H.N. and Blackall, P. J. (2009) The re-use of water in agricultural settings. Microbiology Australia, 30 (1). pp. 38-39.

Chinivasagam, H.N., Corney, B.G., Wright, L.L., Diallo, I.S. and Blackall, P.J. (2007) Detection of Arcobacter spp. in piggery effluent and effluent-irrigated soils in southeast Queensland. Journal of Applied Microbiology, 103 (2). pp. 418-426.

Chinivasagam, H.N., Estella, W., Finn, D., Mayer, D. G., Rodrigues, H. and Diallo, I. (2024) Broiler farming practices using new or re-used bedding, inclusive of free-range, have no impact on Campylobacter levels, species diversity, Campylobacter community profiles and Campylobacter bacteriophages. AIMS Microbiology, 10 (1). pp. 12-40. ISSN 2471-1888

Chinivasagam, H.N., Gardner, E.A., Sands, J. and Blackall, P.J. (2008) The use of F-specific coliphages to assess effluent treatment and reuse schemes. Environmental Technology, 29 (5). pp. 515-524.

Corney, B. G., Colley, J., Djordjevic, S. P., Whittington, R. and Graham, G. C. (1993) Rapid identification of some Leptospira isolates from cattle by random amplified polymorphic DNA fingerprinting. Journal of clinical microbiology, 31 (11). pp. 2927-2932. ISSN 0095-11371098-660X

Corney, B.G., Colley, J. and Graham, G.C. (1997) Simplified analysis of pathogenic leptospiral serovars by random amplified polymorphic DNA fingerprinting. Journal of Medical Microbiology, 46 (11). pp. 927-932. ISSN 0022-2615

Cowley, F.C., Barber, D. G., Houlihan, A.V. and Poppi, D. P. (2015) Immediate and residual effects of heat stress and restricted intake on milk protein and casein composition and energy metabolism. Journal of Dairy Science, 98 (4). pp. 2356-2368.

Cox, J.M., Story, L., Bowles, R. and Woolcock, J.B. (1996) Multilocus enzyme electrophoretic (MEE) analysis of Australian isolates of Salmonella Enteritidis. International Journal of Food Microbiology, 31 (1-3). pp. 273-282. ISSN 0168-1605

Crous, P. W., Groenewald, J. Z., Shivas, R. G., Edwards, J., Seifert, K. A., Alfenas, A. C., Alfenas, R. F., Burgess, T. I., Carnegie, A. J., Hardy, G. E. S. J., Hiscock, N., Hüberli, D., Jung, T., Louis-Seize, G., Okada, G., Pereira, O. L., Stukely, M. J. C., Wang, W., White, G. P., Young, A. J., McTaggart, A. R., Pascoe, I. G., Porter, I. J. and Quaedvlieg, W. (2011) Fungal planet description sheets: 69-91. Persoonia: Molecular Phylogeny and Evolution of Fungi, 26 . pp. 108-156.

Crous, P. W., Summerell, B. A., Shivas, R. G., Romberg, M., Mel'nik, V. A., Verkley, G. J. M. and Groenewald, J. Z. (2011) Fungal planet description sheets: 92-106. Persoonia: Molecular Phylogeny and Evolution of Fungi, 27 . pp. 130-162.

Dexter, A.F., Fletcher, N.L., Creasey, R.G., Filardo, F. F., Boehm, M.W. and Jack, K.S. (2017) Fabrication and characterization of hydrogels formed from designer coiled-coil fibril-forming peptides. RSC Advances, 7 (44). pp. 27260-27271.

Djitro, N., Roach, R., Mann, R., Campbell, P. R., Rodoni, B. and Gambley, C. (2022) Comparative genomics and genomic diversity of Pseudomonas syringae clade 2b-a in Australia. BMC Microbiology, 22 (1). p. 278. ISSN 1471-2180

Duffy, L. L., Blackall, P. J., Cobbold, R. N. and Fegan, N. (2015) Mapping the carriage of flaA-restriction fragment length polymorphism Campylobacter genotypes on poultry carcasses through the processing chain and comparison to clinical isolates. Food Microbiology, 48 . pp. 116-122.

Easton, D. M., Totsika, M., Allsopp, L. P., Phan, M. D., Idris, A., Wurpel, D. J., Sherlock, O., Zhang, B., Venturini, C., Beatson, S. A., Mahony, T. J., Cobbold, R. N. and Schembri, M. A. (2011) Characterization of EhaJ, a New Autotransporter Protein from Enterohemorrhagic and Enteropathogenic Escherichia coli. Frontiers in Microbiology, 2 . p. 120. ISSN 1664-302X (Electronic)1664-302X (Linking)

Foo, C., Farrell, J., Boxell, A., Robertson, I. and Ryan, U. M. (2007) Novel Cryptosporidium genotype in wild Australian mice (Mus domesticus). Applied and Environmental Microbiology, 73 (23). pp. 7693-7696. ISSN 0099-2240

Gilbert, R. A., Davis, C., Gravel, J. L. and Ouwerkerk, D. (2024) Genome sequence and annotation of Pyramidobacter sp. strain YE332, isolated from a cattle rumen fermentation of Leucaena leaf. Microbiology Resource Announcements, 13 (4), e0101223.

Gilbert, R. A., Denman, S. E., Padmanabha, J., Fegan, N., Al Ajmi, D. and McSweeney, C. S. (2008) Effect of diet on the concentration of complex Shiga toxin-producing Escherichia coli and EHEC virulence genes in bovine faeces, hide and carcass. International Journal of Food Microbiology, 121 (2). pp. 208-216. ISSN 0168-1605

Gilbert, R. A., Ouwerkerk, D. and Klieve, A. V. (2015) Modulation of the rumen microbiome. Microbiology Australia, 36 (1). p. 18. ISSN 1324-4272

Gilbert, R. A., Tomkins, N., Padmanabha, J., Gough, J.M., Krause, D.O. and McSweeney, C.S. (2005) Effect of finishing diets on Escherichia coli populations and prevalence of enterohaemorrhagic E. coli virulence genes in cattle faeces. Journal of Applied Microbiology, 99 (4). pp. 885-894. ISSN 1364-5072

Gillies, A. (1957) Inhibitory factors in cheese milk. Queensland Journal of Agricultural Science, 14 (4). pp. 233-240.

Gillies, A. J. (1961) The value of the methylene blue dye reduction test in studying natural inhibitory properties of milk. Queensland Journal of Agricultural Sciences, 18 (1). pp. 157-159.

Golgh, J. M., Jorgensen, W. K. and Kemp, D. H. (1998) Development of tick gut forms of Babesia bigemina in vitro. Journal of Eukaryotic Microbiology, 45 (3). pp. 298-306. ISSN 1550-7408

Greenhill, A.R., Shipton, W.A., Blaney, B.J., Brock, I.J., Kupz, A. and Warner, J.M. (2009) Spontaneous fermentation of traditional sago starch in Papua New Guinea. Food Microbiology, 26 (2). pp. 136-141.

Gruwell, M. E., Hardy, N. B., Gullan, P. J. and Dittmar, K. (2010) Evolutionary Relationships among Primary Endosymbionts of the Mealybug Subfamily Phenacoccinae (Hemiptera: Coccoidea: Pseudococcidae). Applied and Environmental Microbiology, 76 (22). p. 7521.

Guo, S., Wakeham, D., Brouwers, H. J. M., Cobbold, R. N., Abraham, S., Mollinger, J. L., Johnson, J. R., Chapman, T. A., Gordon, D. M., Barrs, V. R. and Trott, D. J. (2015) Human-associated fluoroquinolone-resistant Escherichia coli clonal lineages, including ST354, isolated from canine feces and extraintestinal infections in Australia. Microbes and Infection, 17 (4). pp. 266-274.

Hanna, J. N., Ritchie, S. A., Phillips, D. A., Shield, J., Bailey, M. C., Mackenzie, J. S., Poidinger, M., McCall, B. J. and Mills, P. J. (1996) An outbreak of Japanese encephalitis in the Torres Strait, Australia, 1995. Medical Journal of Australia, 165 (5). pp. 256-260. ISSN 0025-729X

Hawksworth, D. L., Crous, P. W., Redhead, S. A., Reynolds, D. R., Samson, R. A., Seifert, K. A., Taylor, J. W. and Wingfield, M. J. (2011) The Amsterdam Declaration on Fungal Nomenclature. IMA Fungus, 2 (1). pp. 105-112.

Hugall, A., Stanton, J. and Mortiz, C. (1997) Evolution of the AT-rich mitochondrial DNA of the root knot nematode, Meloidogyne hapla. Molecular Biology and Evolution, 14 (1). pp. 40-48. ISSN 1537-1719

Hutchings, C.L., Li, A., Fernandez, K.M., Fletcher, T., Jackson, L.A., Molloy, J.B., Jorgensen, W.K., Lim, C.T. and Cooke, B.M. (2007) New insights into the altered adhesive and mechanical properties of red blood cells parasitized by Babesia bovis. Molecular Microbiology, 65 (4). pp. 1092-1105.

Joachimstal, E.L., Reeves, R.K.H., Hung, J., Nielsen, L.K., Ouwerkerk, D., Klieve, A.V. and Vickers, C.E. (2009) Production of bacteriocins by Streptococcus bovis strains from Australian ruminants. Journal of Applied Microbiology, 108 (2). pp. 428-436.

Joachimsthal, E.L., Reeves, R.K.H., Hung, J., Nielsen, L. K., Ouwerkerk, D., Klieve, A. V. and Vickers, C.E. (2010) Production of bacteriocins by Streptococcus bovis strains from Australian ruminants. Journal of Applied Microbiology, 108 (2). pp. 428-436. ISSN 13645072 (ISSN)

Jones, S. H., Lew, A. E., Jorgensen, W. K. and Barker, S. C. (1997) Babesia bovis: Genome size, number of chromosomes and telomeric probe hybridisation. International Journal for Parasitology, 27 (12). pp. 1569-1573. ISSN 0020-7519

Klieve, A. V. and Swain, R. A. (1993) Estimation of ruminal bacteriophage numbers by pulsed-field gel electrophoresis and laser densitometry. Applied and Environmental Microbiology, 59 (7). pp. 2299-2303.

Kumar, A., Drozd, M., Pina-Mimbela, R., Xu, X., Helmy, Y. A., Antwi, J., Fuchs, J. R., Nislow, C., Templeton, J. M., Blackall, P. J. and Rajashekara, G. (2016) Novel Anti-Campylobacter Compounds Identified Using High Throughput Screening of a Pre-selected Enriched Small Molecules Library. Frontiers in Microbiology, 7 . ISSN 1664-302X

Langhorne, C., Gupta, S. D., Horsman, S., Wood, C., Wood, B. J., Barker, L., Deutscher, A., Price, R., McGowan, M. R., Humphris, M., Ranjbar, S., Henning, J. and Gibson, J. S. (2023) Bacterial culture and antimicrobial susceptibility results from bovine milk samples submitted to four veterinary diagnostic laboratories in Australia from 2015 to 2019. Frontiers in Veterinary Science, 10 . ISSN 2297-1769

Lazarus, B., Paterson, D. L., Mollinger, J. L. and Rogers, B. A. (2015) Do Human Extraintestinal Escherichia coli Infections Resistant to Expanded-Spectrum Cephalosporins Originate From Food-Producing Animals? A Systematic Review. Clinical Infectious Diseases, 60 (3). p. 439. ISSN 1058-4838

Lightbody, L. G. (1965) Bacteriological quality of some farm water supplies in Queensland. Queensland Journal of Agricultural and Animal Sciences, 22 (3). pp. 329-333.

Lightbody, L. G. (1962) Coliform organisms in Queensland cheddar cheese. Queensland Journal of Agricultural Science, 19 (2). pp. 305-307.

Lightbody, L. G. (1964) Effect of low-temperature storage on the bacteriological quality of pasteurized market cream. Queensland Journal of Agricultural Science, 21 (3-4). pp. 311-321.

Lightbody, L. G. (1961) Proteolytic organisms in butter. Queensland Journal of Agricultural Science, 18 (1). pp. 109-122.

Lightbody, L. G. (1955) Results with the Aschaffenburg-Mullen phosphatase test for pasteurized milk. Queensland Journal of Agricultural Science, 12 (4). pp. 175-178.

Lightbody, L. G. and Petersen, H.P. (1962) Psychrophilic organisms in Queensland butter. Queensland Journal of Agricultural Science, 19 (3). pp. 373-384.

Loane, P. C. (1965) Production of bacterial alpha-amylase in Queensland egg pulp. Queensland Journal of Agricultural and Animal Sciences, 22 (3). pp. 335-341.

Madhav, M., Brown, G. W., Morgan, J. A.T., Asgari, S., McGraw, E. A., Munderloh, U. G., Kurtti, T. J. and James, P. (2020) Wolbachia successfully replicate in a newly established horn fly, Haematobia irritans irritans (L.) (Diptera: Muscidae) cell line. Pest Management Science, 76 (7). pp. 2441-2452. ISSN 1526-498X

Madhav, M., Parry, R., Morgan, J. A. T., James, P. and Asgari, S. (2020) Wolbachia Endosymbiont of the Horn Fly (Haematobia irritans irritans): a Supergroup A Strain with Multiple Horizontally Acquired Cytoplasmic Incompatibility Genes. Applied and Environmental Microbiology, 86 (6). e02589-19.

Matthews, A., Muthukumar, S. P. T., Hamill, S. D., Aitken, E. A. B. and Chen, A. (2023) Impact of inoculum density of Fusarium oxysporum f. sp. zingiberi on symptomatic appearances and yield of ginger (Zingiber officinale Roscoe). Access Microbiology, 5 (9). ISSN 2516-8290

McBeath, A. V., East, D. J., Wright, C. L. and Pattison, A. B. (2018) Monitoring microbial functional and structural diversity for management of disease-suppressive soils. Acta Horticulturae, 1196 . pp. 121-128. ISSN 2406-6168

McTackett, A.R. (1956) Oestral cycles and conception rates in two Trichomonas foetus infected dairy herds in Queensland. Queensland Journal of Agricultural Science, 13 (4). pp. 229-239.

Nkuekam, G. K., Wilhelm de Beer, Z., Wingfield, M. J., Mohammed, C., Carnegie, A. J., Pegg, G. S. and Roux, J. (2011) Ophiostoma species (Ophiostomatales, Ascomycota), including two new taxa on eucalypts in Australia. Australian Journal of Botany, 59 (3). pp. 283-297.

Norhana, M.N. W., Azman A., M. N., Poole, S. E. and Deeth, H. C. (2009) Effects of bilimbi (Averrhoa bilimbi L.) and tamarind (Tamarindus indica L.) juice on Listeria monocytogenes Scott A and Salmonella Typhimurium ATCC 14028 and the sensory properties of raw shrimps. International Journal of Food Microbiology, 136 (1). pp. 88-94. ISSN 0168-1605

Oakey, H.J., Gibson, L.F. and George, A.M. (1999) DNA probes specific for Aeromonas hydrophila (HG1). Journal of Applied Microbiology, 86 (2). pp. 187-193. ISSN 1364-5072

Oakley, H.J., Cullen, B.R. and Owens, L. (2002) The complete nucleotide sequence of the Vibrio harveyi bacteriophage VHML. Journal of Applied Microbiology, 93 (6). pp. 1089-1098. ISSN 1364-5072

Olukomaiya, O. O., Adiamo, O. Q., Fernando, W. C., Mereddy, R., Li, X. and Sultanbawa, Y. (2020) Effect of solid-state fermentation on proximate composition, anti-nutritional factor, microbiological and functional properties of lupin flour. Food Chemistry, 315 . p. 126238. ISSN 0308-8146

Ong, C. T., Blackall, P. J., Boe-Hansen, G. B., deWet, S., Hayes, B. J., Indjein, L., Korolik, V., Minchin, C. M., Nguyen, L. T., Nordin, Y., Siddle, H., Turni, C., Venus, B., Westman, M. E., Zhang, Z. and Tabor, A. E. (2024) Whole-genome comparison using complete genomes from Campylobacter fetus strains revealed single nucleotide polymorphisms on non-genomic islands for subspecies differentiation. Frontiers in Microbiology, 15 . ISSN 1664-302X

Ouwerkerk, D., Klieve, A. V. and Forster, R.J. (2002) Enumeration of Megasphaera elsdenii in rumen contents by real-time Taq nuclease assay. Journal of Applied Microbiology, 92 (4). pp. 753-758. ISSN 1364-5072

Pegg, K.G. (1966) Studies on a strain of Alternaria citri Pierce, the causal organism of brown spot of Emperor mandarin. Queensland Journal of Agricultural and Animal Sciences, 23 (1). pp. 15-28.

Poudel, B., McLean, M. S., Platz, G. J., McIlroy, J. A., Sutherland, M. W. and Martin, A. (2019) Investigating hybridisation between the forms of Pyrenophora teres based on Australian barley field experiments and cultural collections. European Journal of Plant Pathology, 153 (2). pp. 465-473. ISSN 09291873 (ISSN)

Richardson, K.C. (1965) Incidence of Byssochlamys fulva in Queensland-grown canned strawberries. Queensland Journal of Agricultural and Animal Sciences, 22 (3). pp. 347-350.

Rodrigues Jardim, B., Kinoti, W. M., Tran-Nguyen, L. T. T., Gambley, C., Rodoni, B. and Constable, F. E. (2021) ‘Candidatus Phytoplasma stylosanthis’, a novel taxon with a diverse host range in Australia, characterised using multilocus sequence analysis of 16S rRNA, secA, tuf, and rp genes. International Journal of Systematic and Evolutionary Microbiology, 71 (1). ISSN 1466-5026

Rodrigues Jardim, B., Tran-Nguyen, L. T. T., Gambley, C., Al-Sadi, A. M., Al-Subhi, A. M., Foissac, X., Salar, P., Cai, H., Yang, J.-Y., Davis, R., Jones, L., Rodoni, B. and Constable, F. E. (2023) The observation of taxonomic boundaries for the 16SrII and 16SrXXV phytoplasmas using genome-based delimitation. International Journal of Systematic and Evolutionary Microbiology, 73 (7). ISSN 1466-5034

Rodrigues Jardim, B., Tran-Nguyen, L. T. T., Gambley, C., Rodoni, B. and Constable, F. E. (2022) Iodixanol density gradients as an effective phytoplasma enrichment approach to improve genome sequencing. Frontiers in Microbiology, 13 . ISSN 1664-302X

Rodrigues Jardim, B., Tran-Nguyen, L. T. T., Gambley, C., Webster, C., Kehoe, M., Bond, S., Rodoni, B. and Constable, F. E. (2024) 'Candidatus Phytoplasma vignae’, assigning a species description to a long-known phytoplasma occurring in northern Australia. International Journal of Systematic and Evolutionary Microbiology, 74 (8). ISSN 1466-5034

Roy Chowdhury, P., Alhamami, T., Venter, H., Veltman, T., Carr, M., Mollinger, J. L., Trott, D. J. and Djordjevic, S. P. (2024) Identification and evolution of ICE-PmuST394: a novel integrative conjugative element in Pasteurella multocida ST394. Journal of Antimicrobial Chemotherapy . ISSN 0305-7453

Sabburg, R., Gregson, A., Urquhart, A. S., Aitken, E. A. B., Smith, L., Thatcher, L. F. and Gardiner, D. M. (2021) A method for high-throughput image-based antifungal screening. Journal of Microbiological Methods, 190 . p. 106342. ISSN 0167-7012

Seshadri, R., Leahy, S. C., Attwood, G. T., Teh, K. H., Lambie, S. C., Cookson, A. L., Eloe-Fadrosh, E. A., Pavlopoulos, G. A., Hadjithomas, M., Varghese, N. J., Paez-Espino, D., Perry, R., Henderson, G., Creevey, C. J., Terrapon, N., Lapebie, P., Drula, E., Lombard, V., Rubin, E., Kyrpides, N. C., Henrissat, B., Woyke, T., Ivanova, N. N., Kelly, W. J., Palevic, N., Janssen, P. H., Ronimus, R. S., Noel, S., Soni, P., Reilly, K., Atherly, T., Ziemer, C., Wright, A., Ishaq, S., Cotta, S., Thompson, S., Crosley, K., McKain, S., Wallace, R. J., Flint, H. J., Martin, J. C., Forster, R. J., Gruninger, R. J., McAllister, T., Gilbert, R. A., Ouwerkerk, D., Klieve, A., Jassim, R. A., Denman, S., McSweeney, C., Rosewarne, S., Koike, S., Kobayashi, Y., Mitsumori, M., Shinkai, T., Cravero, S. and Cerón Cucchi, T. (2018) Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. Nature Biotechnology, 36 (4). pp. 359-367.

Shivas, R.G., Athipunyakom, P., Likhitekaraj, S., Butranu, W., Bhasabutra, T., Somrith, A., Vánky, K. and Vánky, C. (2007) An annotated checklist of smut fungi (Ustilaginomycetes) from Thailand. Australasian Plant Pathology, 36 (4). pp. 376-382.

Shivas, R.G., McTaggart, A.R. and Vánky, K. (2007) Six new smut fungi (Ustilaginomycotina) from Australia. Mycotaxon, 101 . pp. 349-360.

Smith, L., Smith, M. K., Tree, D. J., O'Keefe, D. and Galea, V.J. (2008) Development of a small-plant bioassay to assess banana grown from tissue culture for consistent infection by Fusarium oxysporum f. sp. cubense. Australasian Plant Pathology, 37 (2). pp. 171-179.

Smythe, V.R. (1945) Studies on the effects of transport and storage on the bacteriological quality of raw milk. Queensland Journal of Agricultural Science, 2 (2). pp. 128-156.

Smythe, V.R. (1945) Studies on the effects of transport and storage on the bacteriological quality of raw milk. Part 2. The effect of the milk can on the methylene blue reduction time. Queensland Journal of Agricultural Science, 2 (4). pp. 244-249.

Smythe, V.R. and Gillies, A. (1955) The use of ultra-violet lights for the control of mould on stored cheese. Queensland Journal of Agricultural Science, 12 (4). pp. 179-184.

Smythe, V.R. and Tabrett, D. (1946) A method for detecting sources of milk contamination on farms. Queensland Journal of Agricultural Science, 3 (2). pp. 103-109.

Stanton, J., Hugall, A. and Moritz, C. (1997) Nucleotide polymorphisms and an improved PCR-based mtDNA diagnostic for parthenogenetic root-knot nematodes (Meloidogyne spp.). Fundamental and Applied Nematology, 20 (3). pp. 261-268. ISSN 1164-5571

Stanton, J., Mundo-Ocampo, M., Baldwin, J. G. and Kaplan, D. T. (2001) Radopholus musicola n. sp., a new pathogenic species from Australia (Nematoda : Pratylenchidae). Nematology, 3 (7). pp. 689-698. ISSN 1388-5545

Stirling, G.R. (1985) Host Specificity of Pasteuria Penetrans within the Genus Meloidogyne. Nematologica, 31 (2). pp. 203-209. ISSN 1875-2926

Sultanbawa, Y., Cusack, A., Currie, M. and Davis, C. (2009) An innovative microplate assay to facilitate the detection of antimicrobial activity in plant extracts. Journal of Rapid Methods and Automation in Microbiology, 17 (4). pp. 519-534.

Sun, X., Blackall, P. J., Daniel, P., Chandra, K., Jenkin, S. and Turni, C. (2021) An improved multiplex PCR for Actinobacillus pleuropneumoniae, Glaesserella australis and Pasteurella multocida. Journal of Microbiological Methods, 191 . p. 106360. ISSN 0167-7012

Swain, R. A., Nolan, J. V. and Klieve, A. V. (1996) Natural variability and diurnal fluctuations within the bacteriophage population of the rumen. Applied and Environmental Microbiology, 62 (3). pp. 994-997.

Teakle, D.S. (1956) Technical notes. A lucerne root rot caused by Pythium myriotylum. Queensland Journal of Agricultural Science, 13 (4). pp. 241-243.

Thomas, J. E. and Steele, V. (2011) First report of Panicum mosaic virus in buffalo grass (Stenotaphrum secundatum) from Australia. Australasian Plant Disease Notes, 6 (1). pp. 16-17.

Torok, V. A., Hughes, R. J., Mikkelsen, L. L., Perez-Maldonado, R., Balding, K., MacAlpine, R., Percy, N. J. and Ophel-Keller, K. (2011) Identification and characterization of potential performance-related gut microbiotas in broiler chickens across various feeding trials. Applied and Environmental Microbiology, 77 (17). pp. 5868-5878.

Torok, V. A., Hughes, R. J., Mikkelsen, L. L., Perez-Maldonado, R., Balding, K., MacAlpine, R., Percy, N. J. and Ophel-Keller, K. (2011) Identification and Characterization of Potential Performance-Related Gut Microbiotas in Broiler Chickens across Various Feeding Trials. Applied and Environmental Microbiology, 77 (17). pp. 5868-5878.

Towett-Kirui, S., Morrow, J. L., Close, S., Royer, J. E. and Riegler, M. (2021) Host-endoparasitoid-endosymbiont relationships: concealed Strepsiptera provide new twist to Wolbachia in Australian tephritid fruit flies. Environmental Microbiology, 23 (9). pp. 5587-5604. ISSN 1462-2912

Tulsiani, S. M., Cobbold, R. N., Graham, G. C., Dohnt, M. F., Burns, M.‐A., Leung, L. K.‐P., Field, H. E., Smythe, L. D. and Craig, S. B. (2011) The role of fruit bats in the transmission of pathogenic leptospires in Australia. Annals of Tropical Medicine & Parasitology, 105 (1). pp. 71-84. ISSN 0003-4983

Vasant, B. R., Stafford, R. J., Jennison, A. V., Bennett, S. M., Bell, R. J., Doyle, C. J., Young, J. R., Vlack, S. A., Titmus, P., El Saadi, D., Jarvinen, K. A. J., Coward, P., Barrett, J. L., Staples, M., Graham, R. M. A., Smith, H. V. and Lambert, S. B. (2017) Mild Illness during Outbreak of Shiga Toxin−Producing Escherichia coli O157 Infections Associated with Agricultural Show, Australia. Emerging Infectious Diseases, 23 (10). pp. 1686-1689. ISSN 1080-60401080-6059

Waje, A. F., Lantican, D. V., Pathania, N. and Dela Cueva, F. M. (2022) Draft Genomes of Six Philippine Erwinia mallotivora Isolates: Comparative Genomics and Genome-Wide Analysis of Candidate Secreted Proteins. Current Microbiology, 79 (6). p. 164. ISSN 1432-0991

Wakman, W., Teakle, D.S., Thomas, J.E. and Dietzgen, R. G. (1995) Presence of a clostero-like virus and a bacilliform virus in pineapple plants in Australia. Australian Journal of Agricultural Research, 46 (5). pp. 947-958. ISSN 1836-0947

White, R. T., Ashcroft, M. A., Bauer, M. J., Bell, J., Butkiewicz, D., Alvarez-Fraga, L., Gibson, J. S., Kidsley, A. K., Mollinger, J. L., Peters, K. M., Phan, M.-D., Roberts, L. W., Rogers, B. A., Schembri, M. A., Trott, D. J., Turnidge, J., Forde, B. M. and Beatson, S. A. (2024) The complete genome sequence of five historical Escherichia coli sequence type (ST)1193 strains reveals insights into an emerging pathogen. Access Microbiology .

White, R. T., Ashcroft, M. M., Bauer, M. J., Bell, J., Butkiewicz, D., Alvarez-Fraga, L., Gibson, J. S., Kidsley, A. K., Mollinger, J. L., Peters, K. M., Phan, M.-D., Roberts, L. W., Rogers, B. A., Schembri, M. A., Trott, D. J., Turnidge, J., Forde, B. M. and Beatson, S. A. (2024) The complete genome sequence of five pre-2013 Escherichia coli sequence type (ST)1193 strains reveals insights into an emerging pathogen. Access Microbiology, 6 (10). ISSN 2516-8290

Woods, W.G., Richards, G., Whithear, K.G., Anderson, G. R., Jorgensen, W.K. and Gasser, R.B. (2000) High-resolution electrophoretic procedures for the identification of five Eimeria species from chickens, and detection of population variation. Electrophoresis, 21 (17). pp. 3558-3563.

Young, A.J., Petrasovits, L.A., Croft, B.J., Gillings, M. and Brumbley, S.M. (2006) Genetic uniformity of international isolates of Leifsonia xyli subsp. xyli, causal agent of ratoon stunting disease of sugarcane. Australasian Plant Pathology, 35 . pp. 503-511. ISSN 1448-6032

Book Section

Field, H.E., MacKenzie, J.S. and Daszak, P. (2007) Henipaviruses: Emerging Paramyxoviruses Associated with Fruit Bats. In: Wildlife and Emerging Zoonotic Diseases: The Biology, Circumstances and Consequences of Cross-Species Transmission. Current Topics in Microbiology and Immunology, 315 . -.

Premaratne, A., Zhang, H., Wang, R., Chinivasagam, H.N. and Billington, C. (2021) Phage Biotechnology to Mitigate Antimicrobial Resistance in Agriculture. In: Sustainable Agriculture Reviews 49: Mitigation of Antimicrobial Resistance Vol 2. Natural and Synthetic Approaches. Springer International Publishing, Cham. ISBN 978-3-030-58259-3

Monograph

Chinivasagam, H.N. (2017) A “proof of concept” study to control Campylobacter using bacteriophages. Project Report. Australian Poultry CRC.

Chinivasagam, H.N. (2015) Development of an insect model to assess phage/Campylobacter interactions. Project Report. Australian Poultry CRC.

Chinivasagam, H.N. (2008) Re-use of chicken litter across broiler cycles – managing the food-borne pathogen risk. Project Report. AUSTRALIAN POULTRY CRC.

Kwee, W.S., Bowden, R.P. and Reeves, R.K.H. (1994) Effect of dry hear on bacterial flora of macadamia nuts. Technical Report. Australian Macadamia Society.

Conference or Workshop Item

Blackall, P. J. (2012) Food-borne pathogens - a key issue for all food animal industries. In: 12th Government Food Analysts Conference, Brisbane, Australia.

Bowen, M. K. (2017) Estimating the efficiency of rumen microbial protein synthesis in cattle grazing tropical pastures, and implications for animal performance. In: TropAg 2017 International Tropical Agriculture Conference. High Impact Science to Nourish the world, 20-22 November 2017, Brisbane, Australia..

Chinivasagam, H.N., McGahan, E. and Blackall, P.J. (2007) Food-borne pathogens and pig waste products - the spoke in the wheel? In: Eleventh Biennial Conference of the Australasian Pig Science Association (APSA), 25-28 November 2007, Brisbane.

Dommett, T.W., Bowden, R.P., Kwee, W.S., Reeves, R.K.H. and Vos, A.C. (1999) Steam and other treatment options for contaminated macadamia kernels. In: Australian Macadamia Society Conference.

Dommett, T.W. and Kwee, W.S. (1991) Microbial changes in macadamia nuts from harvesting to processing and survival testing for key organisms. In: Annual Scientific Meeting of the Australian Society for Microbiology, July 1991, Broadbeach, Queensland.

Seididamyeh, M., Netzel, M. E., Mereddy, R. and Sultanbawa, Y. (2022) Antifungal photodynamic inactivation with curcumin. In: TropAg 2022 International Agriculture Conference, 31 October - 2 November 2022, Brisbane, Australia.

Other

Gilbert, R. A. (2023) Pyramidobacter sp. strain YE332 genome sequencing. State of Queensland.