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Analysis of the complete genome sequence of Cucumber mosaic virus strain K

Moyle, R., Pretorius, L. S., Shuey, L. S., Nowak, E. and Schenka, P. M. (2018) Analysis of the complete genome sequence of Cucumber mosaic virus strain K. Genome Announcements, 6 (7). ISSN 21698287 (ISSN)

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Article Link(s): https://doi.org/10.1128/genomeA.00053-18

Abstract

The complete genome sequence of Cucumber mosaic virus strain K was determined by deep RNA sequencing. The tripartite genome consists of a 3,382-nucleotide (nt) RNA1, a 3,050-nt RNA2, and a 2,218-nt RNA3 segment. Phylogenetic analysis placed RNA1 and RNA2 in subgroup IB. However, RNA3 grouped with subgroup IA isolates, indicating a likely recombination event. © 2018 Moyle et al.

Item Type:Article
Business groups:Horticulture and Forestry Science
Additional Information:Open access
Keywords:RNA Article Cucumber mosaic virus gene cluster gene sequence genetic identification genetic variation genome analysis leaf growth leaf tissue nonhuman nucleotide sequence phylogeny quasispecies RNA sequence sequence alignment single nucleotide polymorphism virus culture virus genome virus isolation virus recombination virus strain
Subjects:Science > Botany > Genetics
Plant culture > Food crops
Plant culture > Vegetables
Plant pests and diseases
Plant pests and diseases > Plant pathology
Deposited On:09 Mar 2021 04:32
Last Modified:09 Mar 2021 04:32

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